2009Zhongguo yufang shouyi xuebaoRequires access

Construction of cDNA SSH libraries for grunniens peripheral blood mononuclear cell.

He YanHua, Zhizhong Jing, Guohua Chen, Fang YongXiang, Meng Xue-lian, LI Xiao-qing, Duan Feng-yun, Shengfu Wang

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Abstract

SA subtractive cDNA library was constructed by suppression subtractive hybridization(SSH) using cDNA from Yak peripheral blood mononuclear cells(PBMC) treated with lipopolysaccharide(LPS) and concanavalinA(ConA).The library contained 93 % recombinants with insert size ranged from 200 bp to 1 000 bp.One hundred positive clones were randomly sequenced and analyzed,and 24 differentially expressed genes and 3 novel ESTs were identified.The subtraction efficiency of the SSH cDNA library was confirmed by randomly testing 6 non-repeat sequences by semi-quantitative RT-PCR,of which 5 differential expression molecules were detected.These results suggest that SSH is an effective technique to study gene differential expression gene.

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What this paper is about

SA subtractive cDNA library was constructed by suppression subtractive hybridization(SSH) using cDNA from Yak peripheral blood mononuclear cells(PBMC) treated with lipopolysaccharide(LPS) and concanavalinA(ConA).The library contained 93 % recombinants with insert size ranged from 200 bp to 1 000 bp.One hundred positive clones were randomly sequenced and analyzed,and 24 differentially expressed genes and 3 novel ESTs were identified.The subtraction efficiency of the SSH cDNA library was confirmed by randomly testing 6 non-repeat sequences by semi-quantitative RT-PCR,of which 5 differential expression molecules were detected.These results suggest that SSH is an effective technique to study gene differential expression gene.

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Available abstract

SA subtractive cDNA library was constructed by suppression subtractive hybridization(SSH) using cDNA from Yak peripheral blood mononuclear cells(PBMC) treated with lipopolysaccharide(LPS) and concanavalinA(ConA).The library contained 93 % recombinants with insert size ranged from 200 bp to 1 000 bp.One hundred positive clones were randomly sequenced and analyzed,and 24 differentially expressed genes and 3 novel ESTs were identified.The subtraction efficiency of the SSH cDNA library was confirmed by randomly testing 6 non-repeat sequences by semi-quantitative RT-PCR,of which 5 differential expression molecules were detected.These results suggest that SSH is an effective technique to study gene differential expression gene.

Key concepts: Suppression subtractive hybridization, Biology, Complementary DNA, cDNA library, Molecular biology, Peripheral blood mononuclear cell, Insert (composites), Gene

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