Improving Efficiency in Parameter Estimation Using the Hamiltonian Monte Carlo Algorithm
Mohammed Alfaki
Abstract
Open-access reader
Mohammed Alfaki
Abstract
Open-access reader
This thesis investigates three approaches to improve the performance of the Hamiltonian Monte Carlo algorithm. The first approach enhances the Hamiltonian Monte Carlo by suppressing random walk in the Gibbs sampling using ordered over--relaxation. The second approach investigates the simulation of the Hamiltonian dynamics using an adaptive step--size to reduce the error of the simulation. The third proposal is to combine the two versions into one algorithm.
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This thesis investigates three approaches to improve the performance of the Hamiltonian Monte Carlo algorithm. The first approach enhances the Hamiltonian Monte Carlo by suppressing random walk in the Gibbs sampling using ordered over--relaxation. The second approach investigates the simulation of the Hamiltonian dynamics using an adaptive step--size to reduce the error of the simulation. The third proposal is to combine the two versions into one algorithm.
Key concepts: Hybrid Monte Carlo, Markov chain Monte Carlo, Monte Carlo method, Monte Carlo method in statistical physics, Monte Carlo molecular modeling, Metropolis–Hastings algorithm, Rejection sampling, Gibbs sampling