Isolation and characterization of a gene encoding the Δ1-pyrroline-5-carboxylate synthetase in sugar (Saccharum officinarum L.).
Chengmei Huang, Li‐Tao Yang, Yang‐Rui Li, Deng ZhiNian, Wei YuanWen, Pan YouQiang
Abstract
Chengmei Huang, Li‐Tao Yang, Yang‐Rui Li, Deng ZhiNian, Wei YuanWen, Pan YouQiang
Abstract
Sugarcane variety ROC22 was used as the experimental material,and the water stress treatment was per-formed for the 4 or 5-leafed plants with 25% polyethylene glycol(PEG) 6000 solutions.The cDNA sequence of ScP5CS gene in sugarcane with 2151 bp in length was isolated by homologous cloning,which contained an open reading frame en-coding a protein of 716 amino acids,with GenBank accession number EU005373.Comparing the sequence of ScP5CS with that of sugarcane P5CS reported in GenBank,the nucleotide acid showed high identity(98%),but the deduced amino acid was only 92%.The deduced protein contains putative ATP-binding site,putative leucine domains,Glu-5-kinase domain,putative NADPH-binding domain,conserved GSA-DH domain and feedback inhibition site.Besides,there were more differ-ences in Glu-5-kinase domain from the deduced amino acid of sugarcane P5CS reported(ABM30223),but less for the P5CSs from rice(Oryza sativa) and wheat(Triticum aestivum).So it is confirmed this gene is a new gene of sugarcane P5CS.
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Sugarcane variety ROC22 was used as the experimental material,and the water stress treatment was per-formed for the 4 or 5-leafed plants with 25% polyethylene glycol(PEG) 6000 solutions.The cDNA sequence of ScP5CS gene in sugarcane with 2151 bp in length was isolated by homologous cloning,which contained an open reading frame en-coding a protein of 716 amino acids,with GenBank accession number EU005373.Comparing the sequence of ScP5CS with that of sugarcane P5CS reported in GenBank,the nucleotide acid showed high identity(98%),but the deduced amino acid was only 92%.The deduced protein contains putative ATP-binding site,putative leucine domains,Glu-5-kinase domain,putative NADPH-binding domain,conserved GSA-DH domain and feedback inhibition site.Besides,there were more differ-ences in Glu-5-kinase domain from the deduced amino acid of sugarcane P5CS reported(ABM30223),but less for the P5CSs from rice(Oryza sativa) and wheat(Triticum aestivum).So it is confirmed this gene is a new gene of sugarcane P5CS.
Key concepts: GenBank, Saccharum officinarum, Gene, Amino acid, Oryza sativa, Biology, Open reading frame, Complementary DNA