2019DROPS (Schloss Dagstuhl – Leibniz Center for Informatics)Open access

Isotonic Regression by Dynamic Programming

Günter Rote

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Abstract

For a given sequence of numbers, we want to find a monotonically increasing sequence of the same length that best approximates it in the sense of minimizing the weighted sum of absolute values of the differences. A conceptually easy dynamic programming approach leads to an algorithm with running time O(n log n). While other algorithms with the same running time are known, our algorithm is very simple. The only auxiliary data structure that it requires is a priority queue. The approach extends to other error measures.

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What this paper is about

For a given sequence of numbers, we want to find a monotonically increasing sequence of the same length that best approximates it in the sense of minimizing the weighted sum of absolute values of the differences. A conceptually easy dynamic programming approach leads to an algorithm with running time O(n log n). While other algorithms with the same running time are known, our algorithm is very simple. The only auxiliary data structure that it requires is a priority queue. The approach extends to other error measures.

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Available abstract

For a given sequence of numbers, we want to find a monotonically increasing sequence of the same length that best approximates it in the sense of minimizing the weighted sum of absolute values of the differences. A conceptually easy dynamic programming approach leads to an algorithm with running time O(n log n). While other algorithms with the same running time are known, our algorithm is very simple. The only auxiliary data structure that it requires is a priority queue. The approach extends to other error measures.

Key concepts: Computer science, Isotonic regression, Regression, Isotonic, Mathematics, Statistics, Medicine, Internal medicine

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