Cloning and sequence analysis of interferon-α gene of Zangao canine.
Hong‐Ying Chen, Haiju Dong, Gui BaoAn, Yanyan Jia, Song YaPeng, Shujuan Wang
Abstract
Hong‐Ying Chen, Haiju Dong, Gui BaoAn, Yanyan Jia, Song YaPeng, Shujuan Wang
Abstract
One pair of primers was designed and synthesized according to the canine interferon alpha gene(IFN-α) nucleic acid sequence(AB102731) published in the GenBank.Canine IFN-α gene was amplified by PCR from genome DNA extracted directionally from liver of Zangao canine,then cloned and sequenced.The result showed the full length sequence of Zangao canine IFN-α gene was consisted of 564 bp,which includes one open-reading frame,encoding 187 amino acid residues,three potential N-glycosalation sites and ten cysteines in deduced amino acid sequence.The results of comparative sequence analysis and phylogenetic tree analysis showed there was difference of genus in IFN-α gene,the nearer relationship,the higher homology.This study set a basis the way for future study of biological function and application of canine IFN-α.
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One pair of primers was designed and synthesized according to the canine interferon alpha gene(IFN-α) nucleic acid sequence(AB102731) published in the GenBank.Canine IFN-α gene was amplified by PCR from genome DNA extracted directionally from liver of Zangao canine,then cloned and sequenced.The result showed the full length sequence of Zangao canine IFN-α gene was consisted of 564 bp,which includes one open-reading frame,encoding 187 amino acid residues,three potential N-glycosalation sites and ten cysteines in deduced amino acid sequence.The results of comparative sequence analysis and phylogenetic tree analysis showed there was difference of genus in IFN-α gene,the nearer relationship,the higher homology.This study set a basis the way for future study of biological function and application of canine IFN-α.
Key concepts: GenBank, Gene, Biology, Open reading frame, Sequence analysis, Genetics, Phylogenetic tree, Homology (biology)