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[Establishment and application of a loop-mediated isothermal amplification method for rapid diagnosis of Vibrio cholerae].

Ke Xm, Chen Yy, Lu-lu Gao, Du Zp, Feng Xm, Liao Ry, Zhi-yong Chen, Cao Yc, Q Chen

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Abstract

OBJECTIVE: To establish a loop-mediated isothermal amplification (LAMP) method for rapid diagnosis of Vibrio cholerae. METHODS: Based on the ompW nucleic sequence of Vibrio cholerae, a pair of primers was designed for LAMP. The reaction conditions were optimized, and the specificity, sensitivity, and practicability of LAMP were tested using 47 bacterial strains and simulated contaminated sites. RESULTS: The results of viable bacterium count showed that LAMP was capable of detecting Vibrio cholerae at a level as low as 1.6x10(2) cfu/ml. The minimal detectable concentration was 1.6+10(3) cfu/ml for simulated contaminated samples such as feces and seawater, and 1.6+10(4) cfu/ml for contaminated milk. All the 21 strains of Vibrio cholerae yielded positive results in LAMP, and the 26 strains of other bacteria all showed negative results, with a detection specificity of 100%. CONCLUSION: The established LAMP method has high specificity and sensitivity for detecting Vibrio cholerae and is applicable in field monitoring and epidemiological study of Vibrio cholerae.

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What this paper is about

OBJECTIVE: To establish a loop-mediated isothermal amplification (LAMP) method for rapid diagnosis of Vibrio cholerae. METHODS: Based on the ompW nucleic sequence of Vibrio cholerae, a pair of primers was designed for LAMP. The reaction conditions were optimized, and the specificity, sensitivity, and practicability of LAMP were tested using 47 bacterial strains and simulated contaminated sites. RESULTS: The results of viable bacterium count showed that LAMP was capable of detecting Vibrio cholerae at a level as low as 1.6x10(2) cfu/ml. The minimal detectable concentration was 1.6+10(3) cfu/ml for simulated contaminated samples such as feces and seawater, and 1.6+10(4) cfu/ml for contaminated milk. All the 21 strains of Vibrio cholerae yielded positive results in LAMP, and the 26 strains of other bacteria all showed negative results, with a detection specificity of 100%. CONCLUSION: The established LAMP method has high specificity and sensitivity for detecting Vibrio cholerae and is applicable in field monitoring and epidemiological study of Vibrio cholerae.

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Available abstract

OBJECTIVE: To establish a loop-mediated isothermal amplification (LAMP) method for rapid diagnosis of Vibrio cholerae. METHODS: Based on the ompW nucleic sequence of Vibrio cholerae, a pair of primers was designed for LAMP. The reaction conditions were optimized, and the specificity, sensitivity, and practicability of LAMP were tested using 47 bacterial strains and simulated contaminated sites. RESULTS: The results of viable bacterium count showed that LAMP was capable of detecting Vibrio cholerae at a level as low as 1.6x10(2) cfu/ml. The minimal detectable concentration was 1.6+10(3) cfu/ml for simulated contaminated samples such as feces and seawater, and 1.6+10(4) cfu/ml for contaminated milk. All the 21 strains of Vibrio cholerae yielded positive results in LAMP, and the 26 strains of other bacteria all showed negative results, with a detection specificity of 100%. CONCLUSION: The established LAMP method has high specificity and sensitivity for detecting Vibrio cholerae and is applicable in field monitoring and epidemiological study of Vibrio cholerae.

Key concepts: Vibrio cholerae, Loop-mediated isothermal amplification, Microbiology, Vibrio, Biology, El Tor, Cholera, Bacteria

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[Establishment and application of a loop-mediated isothermal amplification method for rapid diagnosis of Vibrio cholerae]. — Research Paper | ScholarLens