2012Hubei nongye kexueRequires access

Application of EST-SSR Molecular Markers in Tea Varieties Identification

HU Ding-jin

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Abstract

EST-SSR loci were screened from EST sequences of Longjing 43 in the NCBI public database,65 pairs of EST-SSR primers were designed using Primer 5.0 software.The genomic DNA of tea varieties Hubei No.1 tea,Longjing 43,Longjing groups,Yunkang No.10,Xueya 100 and Aifeng were extracted and used as a template to select EST-SSR primers.The results showed that targeted bands of all the 65 pairs of primers were amplified,the amplification rate was 100%.4 pairs of EST-SSR primers showed polymorphism in the 6 samples,could be used for identification of the 6 tea varieties.

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What this paper is about

EST-SSR loci were screened from EST sequences of Longjing 43 in the NCBI public database,65 pairs of EST-SSR primers were designed using Primer 5.0 software.The genomic DNA of tea varieties Hubei No.1 tea,Longjing 43,Longjing groups,Yunkang No.10,Xueya 100 and Aifeng were extracted and used as a template to select EST-SSR primers.The results showed that targeted bands of all the 65 pairs of primers were amplified,the amplification rate was 100%.4 pairs of EST-SSR primers showed polymorphism in the 6 samples,could be used for identification of the 6 tea varieties.

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Available abstract

EST-SSR loci were screened from EST sequences of Longjing 43 in the NCBI public database,65 pairs of EST-SSR primers were designed using Primer 5.0 software.The genomic DNA of tea varieties Hubei No.1 tea,Longjing 43,Longjing groups,Yunkang No.10,Xueya 100 and Aifeng were extracted and used as a template to select EST-SSR primers.The results showed that targeted bands of all the 65 pairs of primers were amplified,the amplification rate was 100%.4 pairs of EST-SSR primers showed polymorphism in the 6 samples,could be used for identification of the 6 tea varieties.

Key concepts: Primer (cosmetics), Biology, genomic DNA, Identification (biology), Genetics, DNA, Botany, Chemistry

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