2013•Hubei nongye kexueRequires access

Analysis on LTR Retrotransposons in Potato Genome

LI Zhi-fe

Abstract

LTR retrotransposons in potato(Solanum tuberosum) genome were analyzed by LTR-FINDER software.Results showed that there were 4 725 full-length LTR retrotransposons with average length of 7 393 bp,accounting for about 4.95% of potato genome bases.The length of LTR in LTR retrotransposons was 786 bp.Phylogenetic tree showed that LTR retrotransposons of potato had high genetic diversity and high heterogeneity.

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Key concepts: Retrotransposon, Genome, Biology, Long terminal repeat, Phylogenetic tree, Solanum tuberosum, Mobile genetic elements, Genetics