Cloning and phylogenetic analysis of mature interleukin-18 gene in AA chicken
Ge Shumin
Abstract
Ge Shumin
Abstract
In this study, specific primers for chicken IL-18 cDNA had been designed and synthesized according to the published nucleic acid sequence of chicken IL-18 cDNA. The cDNA encoding chicken mature IL-18 was amplified by RT-PCR from RNA of chicken splenocytes stimulated with phytohemagglutinin and lipopolysaccharide. PCR product was cloned into pUCm-T vector and then was sequenced. The cloned fragment covered the whole mature IL-18 gene(507bp) and encoded 169 amino acids. The results of comparative sequence analysis indicated that putative amino acid sequence of the cloned IL-18 gene shared 96.5%~100% homology with IL-18 of chicken and turkey, and shared 20.1%~26.6% homology with mammalian IL-18. Phylogenetic tree analysis indicated that the chicken IL-18 have evolutionary relationship with mammalian IL-18, however they showed species difference in function because of selective pressure of immune systems. This study have paved the way for farther studying the expression and function of IL-18 as vaccine adjuvants
A significance statement is not available in the OpenAlex record.
A contribution statement is not available in the OpenAlex record.
Method details are not available in the OpenAlex metadata.
Findings are not separately available in the OpenAlex metadata.
Limitations are not available in the OpenAlex metadata.
Application details are not available in the OpenAlex metadata.
In this study, specific primers for chicken IL-18 cDNA had been designed and synthesized according to the published nucleic acid sequence of chicken IL-18 cDNA. The cDNA encoding chicken mature IL-18 was amplified by RT-PCR from RNA of chicken splenocytes stimulated with phytohemagglutinin and lipopolysaccharide. PCR product was cloned into pUCm-T vector and then was sequenced. The cloned fragment covered the whole mature IL-18 gene(507bp) and encoded 169 amino acids. The results of comparative sequence analysis indicated that putative amino acid sequence of the cloned IL-18 gene shared 96.5%~100% homology with IL-18 of chicken and turkey, and shared 20.1%~26.6% homology with mammalian IL-18. Phylogenetic tree analysis indicated that the chicken IL-18 have evolutionary relationship with mammalian IL-18, however they showed species difference in function because of selective pressure of immune systems. This study have paved the way for farther studying the expression and function of IL-18 as vaccine adjuvants
Key concepts: Complementary DNA, Biology, Phylogenetic tree, Gene, Cloning (programming), Homology (biology), Molecular biology, Sequence analysis