2012Xi'nan nongye xuebaoRequires access

Quick Detection of Potato Viruses by Duplex RT-PCR

Tao Chen

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Abstract

In order to establish a technique using RT-PCR to detect potato viruses,which was rapid,accurate and sensitive,the primers for PVX,PVS,PVA and PLRV fragments were designed based on their coat protein,and a duplex reverse transcription polymerase chain reaction(d-RT-PCR) was optimized from reverse transcription(RT) stage and polymerase chainreaction(PCR) stage.The optimized d-RT-PCR can amplify PVX,PVS,PVA and PLRV simultaneously,and the fragments were 620 bp(PVX),435 bp(PVS),300 bp(PVA), 222bp(PLRV).The result showed that antisense primer rations of two viruses,dNTPs concentration and Mg2+ concentration had great impacts on the detection.The duplex RT-PCR was also suitable for viruses detection of propotato seed both from tissue cultural factory and from naturally field growing potato plant.

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What this paper is about

In order to establish a technique using RT-PCR to detect potato viruses,which was rapid,accurate and sensitive,the primers for PVX,PVS,PVA and PLRV fragments were designed based on their coat protein,and a duplex reverse transcription polymerase chain reaction(d-RT-PCR) was optimized from reverse transcription(RT) stage and polymerase chainreaction(PCR) stage.The optimized d-RT-PCR can amplify PVX,PVS,PVA and PLRV simultaneously,and the fragments were 620 bp(PVX),435 bp(PVS),300 bp(PVA), 222bp(PLRV).The result showed that antisense primer rations of two viruses,dNTPs concentration and Mg2+ concentration had great impacts on the detection.The duplex RT-PCR was also suitable for viruses detection of propotato seed both from tissue cultural factory and from naturally field growing potato plant.

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Available abstract

In order to establish a technique using RT-PCR to detect potato viruses,which was rapid,accurate and sensitive,the primers for PVX,PVS,PVA and PLRV fragments were designed based on their coat protein,and a duplex reverse transcription polymerase chain reaction(d-RT-PCR) was optimized from reverse transcription(RT) stage and polymerase chainreaction(PCR) stage.The optimized d-RT-PCR can amplify PVX,PVS,PVA and PLRV simultaneously,and the fragments were 620 bp(PVX),435 bp(PVS),300 bp(PVA), 222bp(PLRV).The result showed that antisense primer rations of two viruses,dNTPs concentration and Mg2+ concentration had great impacts on the detection.The duplex RT-PCR was also suitable for viruses detection of propotato seed both from tissue cultural factory and from naturally field growing potato plant.

Key concepts: Potato leafroll virus, Potato virus X, Reverse transcription polymerase chain reaction, Primer (cosmetics), Polymerase chain reaction, Biology, Reverse transcriptase, Molecular biology

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