2007•China Journal of BioinformaticsRequires access

DNA sequence alognment algorithm based on colony optimization genetic algorithm

XU Hong-lin

Abstract

Based on ant colony optimization algorithm,ant colony optimization genetic algorithm(ACOGA) is an improved algorithm by optimizing ant colony optimization algorithm's parameters.In this paper,ACOGA is applied to DNA sequence alignment and the ACOGA based sequence alignment algorithm is derived.The experimental results indicate that the proposed sequence alignment algorithm is very efficient.

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Key concepts: Ant colony optimization algorithms, Algorithm, Sequence (biology), Meta-optimization, DNA sequencing, Genetic algorithm, Optimization algorithm, Computer science