Cloning and sequence analysis of gene encoding outer capsid protein VP7 of porcine rotavirus(RV) JL94 strain isolated in China
Shuhong Chen
Abstract
Shuhong Chen
Abstract
The native JL94 strain of porcine rotavirus was propagated and harvested on MA104 cell. Using a pair of primer designed according to the published cDNA sequence of RV's VP7 gene , the full length gene encoding outer capsid protein VP7 was amplified from JL94 strain by reverse transcription-polymerase chain reaction (RT-PCR). The cDNA of VP7gene was inserted into pMD18-T vector and was identified by sequencing, single and double digestion using HindⅢ, HindⅢ and BamHⅠ.The result of its homology comparison with C134/VP7, OSU/VP7, ICB2185/VP7 and YM/VP7 is 87%, 99%, 74% and 83% respectively.
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The native JL94 strain of porcine rotavirus was propagated and harvested on MA104 cell. Using a pair of primer designed according to the published cDNA sequence of RV's VP7 gene , the full length gene encoding outer capsid protein VP7 was amplified from JL94 strain by reverse transcription-polymerase chain reaction (RT-PCR). The cDNA of VP7gene was inserted into pMD18-T vector and was identified by sequencing, single and double digestion using HindⅢ, HindⅢ and BamHⅠ.The result of its homology comparison with C134/VP7, OSU/VP7, ICB2185/VP7 and YM/VP7 is 87%, 99%, 74% and 83% respectively.
Key concepts: Capsid, Complementary DNA, Biology, Gene, Molecular biology, Cloning (programming), Rotavirus, Virology