2014China Animal Husbandry & Veterinary MedicineRequires access

Cloning and Sequence Analysis of c-Myc Gene in Goat

AN Chen-ru

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Abstract

In order to clone sequence of the coding region of the goat c-Myc gene,this study designed specific primers by refering to c-Myc genes coding sequence reported in GenBank including sheep,cattle,pigs,horses,etc.,and then amplified c-Myc coding sequence from embryonic skin tissue of goats by using RT-PCR technique and had sequence analysis.The result indicated that CDS of goat c-Myc gene had 1320bp length including the stop codon.For only 10differences comparing to sheep c-Myc gene nucleotide sequence(GenBank accession number:Z68501.1),homology reached 99.17% and homology of deduced amino acid sequence reached 99.09%.Analysis of homology with other species showed that homology of goat c-Myc gene coding region nucleotide sequence was 91.2%,92.0%,90.2%,86.9%,86.0% with pigs,wolves,humans,rats,mice,and homology of deduced amino acid sequence was 93.6%,96.1%,92.3%,91.1%,89.6%.Using bioinformatics software analysis showed that goat c-Myc protein was localized in the nucleus and contained a HLH domain.This study further researched the function of c-Myc gene and laid the foundation of investigating the effect in the process of goat somatic cell reprogramming.

About this research paper

What this paper is about

In order to clone sequence of the coding region of the goat c-Myc gene,this study designed specific primers by refering to c-Myc genes coding sequence reported in GenBank including sheep,cattle,pigs,horses,etc.,and then amplified c-Myc coding sequence from embryonic skin tissue of goats by using RT-PCR technique and had sequence analysis.The result indicated that CDS of goat c-Myc gene had 1320bp length including the stop codon.For only 10differences comparing to sheep c-Myc gene nucleotide sequence(GenBank accession number:Z68501.1),homology reached 99.17% and homology of deduced amino acid sequence reached 99.09%.Analysis of homology with other species showed that homology of goat c-Myc gene coding region nucleotide sequence was 91.2%,92.0%,90.2%,86.9%,86.0% with pigs,wolves,humans,rats,mice,and homology of deduced amino acid sequence was 93.6%,96.1%,92.3%,91.1%,89.6%.Using bioinformatics software analysis showed that goat c-Myc protein was localized in the nucleus and contained a HLH domain.This study further researched the function of c-Myc gene and laid the foundation of investigating the effect in the process of goat somatic cell reprogramming.

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Available abstract

In order to clone sequence of the coding region of the goat c-Myc gene,this study designed specific primers by refering to c-Myc genes coding sequence reported in GenBank including sheep,cattle,pigs,horses,etc.,and then amplified c-Myc coding sequence from embryonic skin tissue of goats by using RT-PCR technique and had sequence analysis.The result indicated that CDS of goat c-Myc gene had 1320bp length including the stop codon.For only 10differences comparing to sheep c-Myc gene nucleotide sequence(GenBank accession number:Z68501.1),homology reached 99.17% and homology of deduced amino acid sequence reached 99.09%.Analysis of homology with other species showed that homology of goat c-Myc gene coding region nucleotide sequence was 91.2%,92.0%,90.2%,86.9%,86.0% with pigs,wolves,humans,rats,mice,and homology of deduced amino acid sequence was 93.6%,96.1%,92.3%,91.1%,89.6%.Using bioinformatics software analysis showed that goat c-Myc protein was localized in the nucleus and contained a HLH domain.This study further researched the function of c-Myc gene and laid the foundation of investigating the effect in the process of goat somatic cell reprogramming.

Key concepts: GenBank, Gene, Homology (biology), Biology, Sequence analysis, Coding region, Genetics, Molecular biology

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