Preliminary Identification of a Marine Bacterial Strain HZBN43
Ting Zhang
Abstract
Ting Zhang
Abstract
[Objective] The aim of this study is to identify a bacterial strain isolated from ocean water from the Yellow Sea.[Method] Using 16S rRNA technique, a strain from Yellow Sea was preliminarily identified and analyzed.[Result] A 1521 bp fragment of 16S rRNA was amplified from the strain HZBN43;homology analysis between the yielded sequence and the 16S rRNA sequences accessed in NCBI from other strains showed that HZBN43 belonged to Bacillus,and shared 99.79% homologue with the known species Bacillus selenatarsenatis.However,because of the incomplete sequence,the confidence level is just 46,so other corroborations are still required for grouping HZBN43 into an exact species.
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[Objective] The aim of this study is to identify a bacterial strain isolated from ocean water from the Yellow Sea.[Method] Using 16S rRNA technique, a strain from Yellow Sea was preliminarily identified and analyzed.[Result] A 1521 bp fragment of 16S rRNA was amplified from the strain HZBN43;homology analysis between the yielded sequence and the 16S rRNA sequences accessed in NCBI from other strains showed that HZBN43 belonged to Bacillus,and shared 99.79% homologue with the known species Bacillus selenatarsenatis.However,because of the incomplete sequence,the confidence level is just 46,so other corroborations are still required for grouping HZBN43 into an exact species.
Key concepts: 16S ribosomal RNA, Strain (injury), Bacterial strain, Biology, Homology (biology), Bacillus (shape), Ribosomal RNA, Sequence analysis