2023Physical Chemistry Chemical PhysicsOpen access

Isotopic dependence of intramolecular and intermolecular vibrational couplings in cooperative hydrogen bond networks: singly hydrated phenyl-α- d -mannopyranoside as a case study

Ander Camiruaga, Gildas Goldsztejn, Pierre Çarçabal

Open full text 8 citations

Abstract

Hydrogen bonding (HB) is associated with frequency shifts, spectral broadening and intensity variation of the vibrational bands of the donor stretching modes. This is true in all systems, from the most basic molecular models, to more complex ones, and biological molecules. In the gas phase, the latter can be either fully isolated, with only intramolecular HB, or micro-solvated. The conformations of such systems are stabilized by networks of intramolecular and intermolecular HB where the donor groups can be coupled. This has been well-identified in the case of singly hydrated monosaccharides and in particular for phenyl-α-D-mannopyranoside, where the addition of a single water molecule reduces the number of observed conformations to a unique one, stabilized by such a cooperative network of intramolecular and intermolecular HB. In the present study we have re-examined this prototypical system to scrutinize subtle effects of isotopic substitution in the solvent molecule. Besides the obvious isotopic shift, coupling between intramolecular modes of sugar and water is observed, promoted by the intermolecular HB. The systematic substitution of water with heavy water, or methanol, also allowed the decomposition of the relation between HB strength and frequency shift.

Open-access reader

About this research paper

What this paper is about

Hydrogen bonding (HB) is associated with frequency shifts, spectral broadening and intensity variation of the vibrational bands of the donor stretching modes. This is true in all systems, from the most basic molecular models, to more complex ones, and biological molecules. In the gas phase, the latter can be either fully isolated, with only intramolecular HB, or micro-solvated. The conformations of such systems are stabilized by networks of intramolecular and intermolecular HB where the donor groups can be coupled. This has been well-identified in the case of singly hydrated monosaccharides and in particular for phenyl-α-D-mannopyranoside, where the addition of a single water molecule reduces the number of observed conformations to a unique one, stabilized by such a cooperative network of intramolecular and intermolecular HB. In the present study we have re-examined this prototypical system to scrutinize subtle effects of isotopic substitution in the solvent molecule. Besides the obvious isotopic shift, coupling between intramolecular modes of sugar and water is observed, promoted by the intermolecular HB. The systematic substitution of water with heavy water, or methanol, also allowed the decomposition of the relation between HB strength and frequency shift.

Why it matters

OpenAlex reports 8 citations for this work. Citation counts describe recorded attention and do not establish research quality.

Key contribution

A contribution statement is not available in the OpenAlex record.

Method / approach

Method details are not available in the OpenAlex metadata.

Main findings

Findings are not separately available in the OpenAlex metadata.

Limitations

Limitations are not available in the OpenAlex metadata.

Applications

Application details are not available in the OpenAlex metadata.

Available abstract

Hydrogen bonding (HB) is associated with frequency shifts, spectral broadening and intensity variation of the vibrational bands of the donor stretching modes. This is true in all systems, from the most basic molecular models, to more complex ones, and biological molecules. In the gas phase, the latter can be either fully isolated, with only intramolecular HB, or micro-solvated. The conformations of such systems are stabilized by networks of intramolecular and intermolecular HB where the donor groups can be coupled. This has been well-identified in the case of singly hydrated monosaccharides and in particular for phenyl-α-D-mannopyranoside, where the addition of a single water molecule reduces the number of observed conformations to a unique one, stabilized by such a cooperative network of intramolecular and intermolecular HB. In the present study we have re-examined this prototypical system to scrutinize subtle effects of isotopic substitution in the solvent molecule. Besides the obvious isotopic shift, coupling between intramolecular modes of sugar and water is observed, promoted by the intermolecular HB. The systematic substitution of water with heavy water, or methanol, also allowed the decomposition of the relation between HB strength and frequency shift.

Key concepts: Intramolecular force, Intermolecular force, Hydrogen bond, Chemistry, Covalent bond, Methanol, Computational chemistry, Chemical physics

Related papers

Back to paper searchBrowse research topicsOriginal source
Isotopic dependence of intramolecular and intermolecular vibrational couplings in cooperative hydrogen bond networks: singly hydrated phenyl-α- d -mannopyranoside as a case study — Research Paper | ScholarLens