Genome-Scale Modeling Specifies the Metabolic Capabilities of Rhizophagus irregularis
Philipp Wendering, Zoran Nikoloski
Abstract
Philipp Wendering, Zoran Nikoloski
Abstract
Mounting evidence points to the benefits of the symbiotic interactions between the arbuscular mycorrhiza fungus Rhizophagus irregularis and crops; however, the molecular mechanisms underlying the physiological responses of this fungus to different host plants and environments remain largely unknown. We present a manually curated, enzyme-constrained, genome-scale metabolic model of R. irregularis that can accurately predict experimentally observed phenotypes.
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Mounting evidence points to the benefits of the symbiotic interactions between the arbuscular mycorrhiza fungus Rhizophagus irregularis and crops; however, the molecular mechanisms underlying the physiological responses of this fungus to different host plants and environments remain largely unknown. We present a manually curated, enzyme-constrained, genome-scale metabolic model of R. irregularis that can accurately predict experimentally observed phenotypes.
Key concepts: Rhizophagus irregularis, Biology, Fungus, Computational biology, Genome, Symbiosis, Arbuscular mycorrhizal fungi, Scale (ratio)