2022Archives animal breeding/Archiv für TierzuchtOpen access

Comparison of different models for estimation of direct and maternal genetic parameters on body weights in Awassi sheep

Hatice HIZLI, Çiğdem Takma, Ertan Yazgan

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Abstract

The present study was conducted to estimate the (co)variance components for birth and weaning weight (BW and WW) in 8142 Awassi sheep between 2015 and 2017. Estimates were calculated with single-trait analysis by the average information restricted maximum likelihood (AI-REML) method, using a derivative-free algorithm by fitting six different univariate animal models. The negative of the log-likelihood function (LogL), Akaike information criterion (AIC), and Bayesian information criterion (BIC) tests were used for selecting the best fitted model. In addition, the goodness of fit between the two models was compared with the likelihood ratio test (LRT). Depending on the models, ha2 and hm2 ranged from 0.230 to 0.240 and 0.015 to 0.033 for BW, and 0.108 to 0.168 and 0.024 to 0.081 for WW, respectively. Model 3 for BW and Model 2 for WW were chosen as the best models by LogL comparison criteria. According to the LRT ratio test Model 2, Model 3, and Model 4 for BW and Model 2, Model 3, Model 4, Model 5, and Model 6 for WW were significant ( p <0.05). Including maternal genetic or maternal permanent environmental effects in these models was found to be significant in terms of parameter estimates.

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The present study was conducted to estimate the (co)variance components for birth and weaning weight (BW and WW) in 8142 Awassi sheep between 2015 and 2017. Estimates were calculated with single-trait analysis by the average information restricted maximum likelihood (AI-REML) method, using a derivative-free algorithm by fitting six different univariate animal models. The negative of the log-likelihood function (LogL), Akaike information criterion (AIC), and Bayesian information criterion (BIC) tests were used for selecting the best fitted model. In addition, the goodness of fit between the two models was compared with the likelihood ratio test (LRT). Depending on the models, ha2 and hm2 ranged from 0.230 to 0.240 and 0.015 to 0.033 for BW, and 0.108 to 0.168 and 0.024 to 0.081 for WW, respectively. Model 3 for BW and Model 2 for WW were chosen as the best models by LogL comparison criteria. According to the LRT ratio test Model 2, Model 3, and Model 4 for BW and Model 2, Model 3, Model 4, Model 5, and Model 6 for WW were significant ( p <0.05). Including maternal genetic or maternal permanent environmental effects in these models was found to be significant in terms of parameter estimates.

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Available abstract

The present study was conducted to estimate the (co)variance components for birth and weaning weight (BW and WW) in 8142 Awassi sheep between 2015 and 2017. Estimates were calculated with single-trait analysis by the average information restricted maximum likelihood (AI-REML) method, using a derivative-free algorithm by fitting six different univariate animal models. The negative of the log-likelihood function (LogL), Akaike information criterion (AIC), and Bayesian information criterion (BIC) tests were used for selecting the best fitted model. In addition, the goodness of fit between the two models was compared with the likelihood ratio test (LRT). Depending on the models, ha2 and hm2 ranged from 0.230 to 0.240 and 0.015 to 0.033 for BW, and 0.108 to 0.168 and 0.024 to 0.081 for WW, respectively. Model 3 for BW and Model 2 for WW were chosen as the best models by LogL comparison criteria. According to the LRT ratio test Model 2, Model 3, and Model 4 for BW and Model 2, Model 3, Model 4, Model 5, and Model 6 for WW were significant ( p <0.05). Including maternal genetic or maternal permanent environmental effects in these models was found to be significant in terms of parameter estimates.

Key concepts: Akaike information criterion, Bayesian information criterion, Awassi, Restricted maximum likelihood, Mathematics, Deviance information criterion, Statistics, Goodness of fit

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Comparison of different models for estimation of direct and maternal genetic parameters on body weights in Awassi sheep — Research Paper | ScholarLens