Expression Proteomics
Reiner Westermeier, Tom Naven
Abstract
Reiner Westermeier, Tom Naven
Abstract
Two-dimensional Electrophoresis Evolution of 2-D methodology Sample preparation First dimension: Isoelectric focusing Second dimension: SDS-PAGE Detection of protein spots Image analysis Spot handling Spot cutting Protein cleavage Mass spectrometry Ionisation Ion separation Tandem mass spectrometry (MS/MS) Protein identification by database searching Protein mass fingerprint Peptide mass fingerprinting combined with composition information Peptide mass fingerprint combined with partial sequence information Product ion MS/MS sequence data De novo sequencing Methods of proteome analysis 2D-MS LC-MS/MS Quantitative proteomics
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Two-dimensional Electrophoresis Evolution of 2-D methodology Sample preparation First dimension: Isoelectric focusing Second dimension: SDS-PAGE Detection of protein spots Image analysis Spot handling Spot cutting Protein cleavage Mass spectrometry Ionisation Ion separation Tandem mass spectrometry (MS/MS) Protein identification by database searching Protein mass fingerprint Peptide mass fingerprinting combined with composition information Peptide mass fingerprint combined with partial sequence information Product ion MS/MS sequence data De novo sequencing Methods of proteome analysis 2D-MS LC-MS/MS Quantitative proteomics
Key concepts: Peptide mass fingerprinting, Bottom-up proteomics, Mass spectrometry, Proteome, Proteomics, Top-down proteomics, Tandem mass spectrometry, Isoelectric focusing