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2021•Physical Chemistry Chemical PhysicsRequires access

Divide-and-link peptide docking: a fragment-based peptide docking protocol

Lu Sun, Tingting Fu, Dan Zhao, Hongjun Fan, Shijun Zhong

Open publisher page 11 citations

Abstract

and AutoDock CrankPep achieved superior results. DLPepDock performed better than the other 15 docking protocols implemented in nine docking programs (HPepDock, DockThor, rDock, Glide, LeDock, AutoDock, AutoDock Vina, Surflex, and GOLD). The Linux scripts to call the third-party tools and run all the calculations.

About this research paper

What this paper is about

and AutoDock CrankPep achieved superior results. DLPepDock performed better than the other 15 docking protocols implemented in nine docking programs (HPepDock, DockThor, rDock, Glide, LeDock, AutoDock, AutoDock Vina, Surflex, and GOLD). The Linux scripts to call the third-party tools and run all the calculations.

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OpenAlex reports 11 citations for this work. Citation counts describe recorded attention and do not establish research quality.

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Method / approach

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Available abstract

and AutoDock CrankPep achieved superior results. DLPepDock performed better than the other 15 docking protocols implemented in nine docking programs (HPepDock, DockThor, rDock, Glide, LeDock, AutoDock, AutoDock Vina, Surflex, and GOLD). The Linux scripts to call the third-party tools and run all the calculations.

Key concepts: AutoDock, Docking (animal), Searching the conformational space for docking, Protein–ligand docking, Peptide, Chemistry, Molecular dynamics, Computer science

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