The complete chloroplast genome of Aesculus chinensis
Zhiyong Zhang, Ying Chen, Xuebo Jiang, Piao Zhu, Ling Li, Yanling Zeng, Tianming Tang
Abstract
Zhiyong Zhang, Ying Chen, Xuebo Jiang, Piao Zhu, Ling Li, Yanling Zeng, Tianming Tang
Abstract
The complete chloroplast genome of Aesculus chinensis was obtained with Illumina HiSeq X Ten. The chloroplast genome is 155,528 bp in length, including a pair of inverted repeat (IR) regions of 25,656 bp, a large single-copy (LSC) region of 85,489 bp, and a small single-copy (SSC) region of 18,727 bp. It contains 115 genes, including 80 protein-coding genes, 31 transfer RNAs, and four ribosomal RNAs. The total GC content is 37.9%, whereas the corresponding values of the LSC, SSC, and IR regions are 36.1%, 31.8%, and 43.2%, separately. Phylogenetic analysis of the protein-coding genes showed a close relationship with Aesculus wangii in Hippocastanaceae.
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The complete chloroplast genome of Aesculus chinensis was obtained with Illumina HiSeq X Ten. The chloroplast genome is 155,528 bp in length, including a pair of inverted repeat (IR) regions of 25,656 bp, a large single-copy (LSC) region of 85,489 bp, and a small single-copy (SSC) region of 18,727 bp. It contains 115 genes, including 80 protein-coding genes, 31 transfer RNAs, and four ribosomal RNAs. The total GC content is 37.9%, whereas the corresponding values of the LSC, SSC, and IR regions are 36.1%, 31.8%, and 43.2%, separately. Phylogenetic analysis of the protein-coding genes showed a close relationship with Aesculus wangii in Hippocastanaceae.
Key concepts: Inverted repeat, Biology, Genome, Gene, GC-content, Phylogenetic tree, Genetics, Chloroplast