Sphingomonas lutea sp. nov., isolated from freshwater of an artificial reservoir
Ji Hee Lee, Dae In Kim, Joo Won Kang, Chi Nam Seong
Abstract
Ji Hee Lee, Dae In Kim, Joo Won Kang, Chi Nam Seong
Abstract
An aerobic, Gram-stain-negative, gliding and yellow-pigmented bacterium, designated strain JS5T, was isolated from freshwater of Juam reservoir, Republic of Korea. Cells were catalase-positive and oxidase-negative. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain JS5T forms an independent lineage within the genus Sphingomonas. Strain JS5T was related distantly to 'Sphingomonas parvus' GP20-2 (98.2 % 16S rRNA gene sequence similarity), Sphingomonas sediminicola Dae 20T (96.8 %) and Sphingomonas daechungensis CH15-11T (96.7 %). The major fatty acids of strain JS5T were C16 : 0, summed feature 3 comprising C16 : 1ω7c and/or C16 : 1ω6c and summed feature 8 comprising C18 : 1ω7c and/or C18 : 1ω6c. The predominant isoprenoid quinone of the isolate was ubiquinone-10. The DNA G+C content of strain JS5T was 65 mol%. Phenotypic characteristics distinguished strain JS5T from related species of the genus Sphingomonas. On the basis of the evidence presented in this study, a novel species, Sphingomonaslutea sp. nov., is proposed to accommodate strain JS5T (=KCTC 23642T=JCM 18309T).
OpenAlex reports 15 citations for this work. Citation counts describe recorded attention and do not establish research quality.
A contribution statement is not available in the OpenAlex record.
Method details are not available in the OpenAlex metadata.
Findings are not separately available in the OpenAlex metadata.
Limitations are not available in the OpenAlex metadata.
Application details are not available in the OpenAlex metadata.
An aerobic, Gram-stain-negative, gliding and yellow-pigmented bacterium, designated strain JS5T, was isolated from freshwater of Juam reservoir, Republic of Korea. Cells were catalase-positive and oxidase-negative. The neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain JS5T forms an independent lineage within the genus Sphingomonas. Strain JS5T was related distantly to 'Sphingomonas parvus' GP20-2 (98.2 % 16S rRNA gene sequence similarity), Sphingomonas sediminicola Dae 20T (96.8 %) and Sphingomonas daechungensis CH15-11T (96.7 %). The major fatty acids of strain JS5T were C16 : 0, summed feature 3 comprising C16 : 1ω7c and/or C16 : 1ω6c and summed feature 8 comprising C18 : 1ω7c and/or C18 : 1ω6c. The predominant isoprenoid quinone of the isolate was ubiquinone-10. The DNA G+C content of strain JS5T was 65 mol%. Phenotypic characteristics distinguished strain JS5T from related species of the genus Sphingomonas. On the basis of the evidence presented in this study, a novel species, Sphingomonaslutea sp. nov., is proposed to accommodate strain JS5T (=KCTC 23642T=JCM 18309T).
Key concepts: Sphingomonas, 16S ribosomal RNA, Biology, Strain (injury), Phylogenetic tree, Bacteria, Microbiology, Botany