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Genetic resistance towards Salmonella infection in pigs.

Nadine Botteldoorn, Lieve Herman, Stefaan De Smet

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Abstract

A PCR-RFLP of intron 1 and intron 2 of the Nramp1 gene described as a potential candidate gene in controlling pig resistance to Salmonella infections was optimised and an association between the Salmonella status and the polymorphisms was investigated. For intron 1 new primers were designed and the amplicon of 622 bp was restricted with Hinf I to give fragments of 280 bp, 220 bp and 100 bp for allele A and 76 bp, 100 bp, 144 bp, and 280 bp for allele B. For intron 2 a new polymorphism was detected (a deletion) with fragments of 210 bp and 199 bp after amplification respectively for allele A and B. The frequency of allele B and A was 0.93 and 0.90 on a total of 180 and 205 pigs for the polymorphism in intron 1 and intron 2 respectively in a mixed population of hybrid and purebred pigs. Similar allele frequencies of allele B and A of 0.90 and 0.91 respectively in intron 1 and intron 2 were found in a sample of 392 and 391 slaughter pigs. In the latter population, no association between the Nramp1 genotypes and the colon Salmonella status or the ELISA status could be demonstrated.

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What this paper is about

A PCR-RFLP of intron 1 and intron 2 of the Nramp1 gene described as a potential candidate gene in controlling pig resistance to Salmonella infections was optimised and an association between the Salmonella status and the polymorphisms was investigated. For intron 1 new primers were designed and the amplicon of 622 bp was restricted with Hinf I to give fragments of 280 bp, 220 bp and 100 bp for allele A and 76 bp, 100 bp, 144 bp, and 280 bp for allele B. For intron 2 a new polymorphism was detected (a deletion) with fragments of 210 bp and 199 bp after amplification respectively for allele A and B. The frequency of allele B and A was 0.93 and 0.90 on a total of 180 and 205 pigs for the polymorphism in intron 1 and intron 2 respectively in a mixed population of hybrid and purebred pigs. Similar allele frequencies of allele B and A of 0.90 and 0.91 respectively in intron 1 and intron 2 were found in a sample of 392 and 391 slaughter pigs. In the latter population, no association between the Nramp1 genotypes and the colon Salmonella status or the ELISA status could be demonstrated.

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Available abstract

A PCR-RFLP of intron 1 and intron 2 of the Nramp1 gene described as a potential candidate gene in controlling pig resistance to Salmonella infections was optimised and an association between the Salmonella status and the polymorphisms was investigated. For intron 1 new primers were designed and the amplicon of 622 bp was restricted with Hinf I to give fragments of 280 bp, 220 bp and 100 bp for allele A and 76 bp, 100 bp, 144 bp, and 280 bp for allele B. For intron 2 a new polymorphism was detected (a deletion) with fragments of 210 bp and 199 bp after amplification respectively for allele A and B. The frequency of allele B and A was 0.93 and 0.90 on a total of 180 and 205 pigs for the polymorphism in intron 1 and intron 2 respectively in a mixed population of hybrid and purebred pigs. Similar allele frequencies of allele B and A of 0.90 and 0.91 respectively in intron 1 and intron 2 were found in a sample of 392 and 391 slaughter pigs. In the latter population, no association between the Nramp1 genotypes and the colon Salmonella status or the ELISA status could be demonstrated.

Key concepts: Intron, Biology, Allele, Genetics, Salmonella, Genotype, Population, Amplicon

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