2010Hereditas (Beijing)Open access

Genetic diversity of different geographical populations of Oxya chinensis based on AFLP analysis

Jin Ma, Tao Li, Wen-Min LONG, Weiwei An, Yaping Guo, Enbo Ma

Open full text 1 citations

Abstract

In order to study the genetic diversity and genetic structure of populations, 7 populations of Oxya chinensis from 7 provinces (or cities) of China were analyzed using AFLP technique. A total of 336 reproducible bands were amplified with 7 primer combinations from 128 individuals. Two hundred and ninety-two bands (86.90%) were polymorphic. High genetic diversity was found among O. chinensis populations and Wanning population had higher genetic diversity than other populations. Mantel test (r=0.27, P=0.89) suggested that there was no significant association between genetic distance and geographic distance. Remarkable genetic differentiation was found among populations. Unweighted pair group method average (UPGMA) tree showed that the 7 O. chinensis populations were divided into 3 groups: Changping of Beijing, Tai-yuan of Shanxi and Jining of Shandong populations in the north; Hanzhong of Shaanxi, Changsha of Hunan and Laibin of Guangxi populations in the south; and Wanning of Hainan population. Principal component analysis indicated significant genetic differentiation of the north and the south populations and island and continent populations existed in the 7 O. chinensis populations because of geographic isolation.

Open-access reader

About this research paper

What this paper is about

In order to study the genetic diversity and genetic structure of populations, 7 populations of Oxya chinensis from 7 provinces (or cities) of China were analyzed using AFLP technique. A total of 336 reproducible bands were amplified with 7 primer combinations from 128 individuals. Two hundred and ninety-two bands (86.90%) were polymorphic. High genetic diversity was found among O. chinensis populations and Wanning population had higher genetic diversity than other populations. Mantel test (r=0.27, P=0.89) suggested that there was no significant association between genetic distance and geographic distance. Remarkable genetic differentiation was found among populations. Unweighted pair group method average (UPGMA) tree showed that the 7 O. chinensis populations were divided into 3 groups: Changping of Beijing, Tai-yuan of Shanxi and Jining of Shandong populations in the north; Hanzhong of Shaanxi, Changsha of Hunan and Laibin of Guangxi populations in the south; and Wanning of Hainan population. Principal component analysis indicated significant genetic differentiation of the north and the south populations and island and continent populations existed in the 7 O. chinensis populations because of geographic isolation.

Why it matters

OpenAlex reports 1 citations for this work. Citation counts describe recorded attention and do not establish research quality.

Key contribution

A contribution statement is not available in the OpenAlex record.

Method / approach

Method details are not available in the OpenAlex metadata.

Main findings

Findings are not separately available in the OpenAlex metadata.

Limitations

Limitations are not available in the OpenAlex metadata.

Applications

Application details are not available in the OpenAlex metadata.

Available abstract

In order to study the genetic diversity and genetic structure of populations, 7 populations of Oxya chinensis from 7 provinces (or cities) of China were analyzed using AFLP technique. A total of 336 reproducible bands were amplified with 7 primer combinations from 128 individuals. Two hundred and ninety-two bands (86.90%) were polymorphic. High genetic diversity was found among O. chinensis populations and Wanning population had higher genetic diversity than other populations. Mantel test (r=0.27, P=0.89) suggested that there was no significant association between genetic distance and geographic distance. Remarkable genetic differentiation was found among populations. Unweighted pair group method average (UPGMA) tree showed that the 7 O. chinensis populations were divided into 3 groups: Changping of Beijing, Tai-yuan of Shanxi and Jining of Shandong populations in the north; Hanzhong of Shaanxi, Changsha of Hunan and Laibin of Guangxi populations in the south; and Wanning of Hainan population. Principal component analysis indicated significant genetic differentiation of the north and the south populations and island and continent populations existed in the 7 O. chinensis populations because of geographic isolation.

Key concepts: UPGMA, Genetic diversity, Biology, Geographical distance, Genetic distance, Population, Isolation by distance, Mantel test

Related papers

Back to paper searchBrowse research topicsOriginal source
Genetic diversity of different geographical populations of Oxya chinensis based on AFLP analysis — Research Paper | ScholarLens