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Analysis on Partial Sequence of Mitochondrial DNA D-loop Region Variation Position of Goat

Yuehui Ma

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Abstract

In this study,we aligned and analyzed 453 bp segment of mitochondrial DNA D-loop hypervariable region(Positions 15 735-16 187 bp of complete mitochondrial genome) from 1 182 sequences,neighbor-joining(NJ) tree and network showed that the sequences were divided into four distinct mtDNA lineages A-D,and included 1 001,134,24 and 13 sequences,respectively.After the alignment of the sequences,nucleotide position of A,B,C and D lineage specific were acquired,and included 5,6,18 and 7 variation positions,respectively,moreover,2 lineages common variation positions were found.

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What this paper is about

In this study,we aligned and analyzed 453 bp segment of mitochondrial DNA D-loop hypervariable region(Positions 15 735-16 187 bp of complete mitochondrial genome) from 1 182 sequences,neighbor-joining(NJ) tree and network showed that the sequences were divided into four distinct mtDNA lineages A-D,and included 1 001,134,24 and 13 sequences,respectively.After the alignment of the sequences,nucleotide position of A,B,C and D lineage specific were acquired,and included 5,6,18 and 7 variation positions,respectively,moreover,2 lineages common variation positions were found.

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Available abstract

In this study,we aligned and analyzed 453 bp segment of mitochondrial DNA D-loop hypervariable region(Positions 15 735-16 187 bp of complete mitochondrial genome) from 1 182 sequences,neighbor-joining(NJ) tree and network showed that the sequences were divided into four distinct mtDNA lineages A-D,and included 1 001,134,24 and 13 sequences,respectively.After the alignment of the sequences,nucleotide position of A,B,C and D lineage specific were acquired,and included 5,6,18 and 7 variation positions,respectively,moreover,2 lineages common variation positions were found.

Key concepts: Biology, Mitochondrial DNA, Hypervariable region, D-loop, Lineage (genetic), Genetics, mtDNA control region, Genome

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