Cluster analysis on 14 Sea-Island Cotton by SSRs
Yong-jun Zhu
Abstract
Yong-jun Zhu
Abstract
The genetic relationships among 14 Sea-Island Cotton varieties were analyzed by SSRs to provide credible genetic information in breeding Sea-Island Cotton 280 distinctive loci in total were amplified f rom 41 pairs of SSR primers,and 214 were polymorphic,which accounted for 76.4 %.1 to 15 polymorphic loci could be amplified from each primer,with an average of 6.83.The 14 Sea-Island Cotton varieties could be classified into 4 groups at the level of SM=0.64 by cluster analysis.SSR markers proved to be the work of Sea-Island cotton breeding practice of matching parents,to provide a reliable basis for the molecular level.
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The genetic relationships among 14 Sea-Island Cotton varieties were analyzed by SSRs to provide credible genetic information in breeding Sea-Island Cotton 280 distinctive loci in total were amplified f rom 41 pairs of SSR primers,and 214 were polymorphic,which accounted for 76.4 %.1 to 15 polymorphic loci could be amplified from each primer,with an average of 6.83.The 14 Sea-Island Cotton varieties could be classified into 4 groups at the level of SM=0.64 by cluster analysis.SSR markers proved to be the work of Sea-Island cotton breeding practice of matching parents,to provide a reliable basis for the molecular level.
Key concepts: Microsatellite, Biology, Primer (cosmetics), Cluster (spacecraft), Genetics, Geography, Gene, Allele