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Real-Time Fluorescence Helicase-Dependent Isothermal DNA Amplification Method for Rapid Detection of Listeria monocytogenes in Foods

Zhang Mingr

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Abstract

The purpose of this study was to develop a real-time helicase-dependent isothermal DNA amplification(HDA) method for the rapid detection of Listeria monocytogenes. Based on the platform of real-time PCR, pairs of primers targeting the hemolysin gene(hly) of Listeria monocytogenes were designed, and genomic DNA was extracted from a standard strain of L. monocytogenes for use as the template. The reaction temperature, primers and template DNA concentration were optimized. Compared with real-time PCR method, the specificity and sensitivity of the real-time HDA method were evaluated with L. monocytogenes and 10 bacteria control strains, and then this developed method was used to detect L. monocytogenes in real samples. The results showed that the optimal primer concentration, reaction temperature and time for real-time HDA system were 0.075 mol/L, 65 ℃ and 80 min(40 cycles), respectively. This system showed a high specificity and sensitivity. Thus a real-time HDA method for rapid and specific detection of L. monocytogenes has been successfully established.

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What this paper is about

The purpose of this study was to develop a real-time helicase-dependent isothermal DNA amplification(HDA) method for the rapid detection of Listeria monocytogenes. Based on the platform of real-time PCR, pairs of primers targeting the hemolysin gene(hly) of Listeria monocytogenes were designed, and genomic DNA was extracted from a standard strain of L. monocytogenes for use as the template. The reaction temperature, primers and template DNA concentration were optimized. Compared with real-time PCR method, the specificity and sensitivity of the real-time HDA method were evaluated with L. monocytogenes and 10 bacteria control strains, and then this developed method was used to detect L. monocytogenes in real samples. The results showed that the optimal primer concentration, reaction temperature and time for real-time HDA system were 0.075 mol/L, 65 ℃ and 80 min(40 cycles), respectively. This system showed a high specificity and sensitivity. Thus a real-time HDA method for rapid and specific detection of L. monocytogenes has been successfully established.

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Available abstract

The purpose of this study was to develop a real-time helicase-dependent isothermal DNA amplification(HDA) method for the rapid detection of Listeria monocytogenes. Based on the platform of real-time PCR, pairs of primers targeting the hemolysin gene(hly) of Listeria monocytogenes were designed, and genomic DNA was extracted from a standard strain of L. monocytogenes for use as the template. The reaction temperature, primers and template DNA concentration were optimized. Compared with real-time PCR method, the specificity and sensitivity of the real-time HDA method were evaluated with L. monocytogenes and 10 bacteria control strains, and then this developed method was used to detect L. monocytogenes in real samples. The results showed that the optimal primer concentration, reaction temperature and time for real-time HDA system were 0.075 mol/L, 65 ℃ and 80 min(40 cycles), respectively. This system showed a high specificity and sensitivity. Thus a real-time HDA method for rapid and specific detection of L. monocytogenes has been successfully established.

Key concepts: Listeria monocytogenes, Loop-mediated isothermal amplification, Real-time polymerase chain reaction, Listeria, Primer (cosmetics), genomic DNA, DNA, Molecular biology

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