QSAR study of triphenylacrylonitrile derivatives using artificial neural network
Yingfang Fan
Abstract
Yingfang Fan
Abstract
The relationship between the affinity of 24 triphenylacrylonitrile derivatives acting on estrogen receptor in calf uterine tissue (lg1C) and X-hydroxy indicators (I),molecular surface area (SA), and the sum of net charge on B ring (QB) was discussed based on an improved back-propagation (BP) algorithm of artificial neural network (ANN). Selecting 20 compounds as the training set,the QSAR model was established with the ANN method. The residual 4 compounds as the prediction set were applied to test the predicted effect of the QSAR model. It was obtained that the correlation coefficient of QSAR model was R=0.9969 and the standard deviation was SD=0.0164. For the prediction set, R=0.9969 and SD=0.1533. The QSAR model for the same 24 compounds was also established with the multiple linear regression (MLR) method for comparison,with which R=0.9360 and SD=0.3779 were obtained. The results indicated that the fitted performance of ANN method is better than that of MLR model,which is comparatively precise and has a preferable predicted effect.
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The relationship between the affinity of 24 triphenylacrylonitrile derivatives acting on estrogen receptor in calf uterine tissue (lg1C) and X-hydroxy indicators (I),molecular surface area (SA), and the sum of net charge on B ring (QB) was discussed based on an improved back-propagation (BP) algorithm of artificial neural network (ANN). Selecting 20 compounds as the training set,the QSAR model was established with the ANN method. The residual 4 compounds as the prediction set were applied to test the predicted effect of the QSAR model. It was obtained that the correlation coefficient of QSAR model was R=0.9969 and the standard deviation was SD=0.0164. For the prediction set, R=0.9969 and SD=0.1533. The QSAR model for the same 24 compounds was also established with the multiple linear regression (MLR) method for comparison,with which R=0.9360 and SD=0.3779 were obtained. The results indicated that the fitted performance of ANN method is better than that of MLR model,which is comparatively precise and has a preferable predicted effect.
Key concepts: Quantitative structure–activity relationship, Artificial neural network, Linear regression, Test set, Correlation coefficient, Set (abstract data type), Residual, Biological system