2008Computer Knowledge and TechnologyRequires access

Sequence Alignment Algorithms in Bioinformatics

Rui Wang

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Abstract

Bioinformatics is the subject of using computer to store,retrieve and analyze biological information. Sequence alignment is a basic problem in Bioinformatics,and its main research work is to develop rapid and effective sequence alignment algorithms. We may discover functional,structural and evolutionary information in biological sequences by sequence comparing. This paper introduces the development actuality of sequence alignment algorithms,describes variety of sequence alignment algorithm and analyses the advantages and disadvantages of them.

About this research paper

What this paper is about

Bioinformatics is the subject of using computer to store,retrieve and analyze biological information. Sequence alignment is a basic problem in Bioinformatics,and its main research work is to develop rapid and effective sequence alignment algorithms. We may discover functional,structural and evolutionary information in biological sequences by sequence comparing. This paper introduces the development actuality of sequence alignment algorithms,describes variety of sequence alignment algorithm and analyses the advantages and disadvantages of them.

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Available abstract

Bioinformatics is the subject of using computer to store,retrieve and analyze biological information. Sequence alignment is a basic problem in Bioinformatics,and its main research work is to develop rapid and effective sequence alignment algorithms. We may discover functional,structural and evolutionary information in biological sequences by sequence comparing. This paper introduces the development actuality of sequence alignment algorithms,describes variety of sequence alignment algorithm and analyses the advantages and disadvantages of them.

Key concepts: Alignment-free sequence analysis, Computer science, Sequence (biology), Sequence alignment, Variety (cybernetics), Multiple sequence alignment, Algorithm, Structural bioinformatics

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