Relationship between RAPD Genotype and Pathotype of Rice Sheathe Blight Fungi (Rhizoctonia solani AG-1 IA) in Guangdong Province
Runhua Yi
Abstract
Runhua Yi
Abstract
It is firstly analyzed the relationship between randomly amplified polymorphic DNA (RAPD) genotype and pathotype of rice sheathe blight fungi (Rhizoctonia solani AG-1 IA ) from Guangdong province in China. The results show that pathotype diversity (H=3.485) and genetic diversity are abundant in rice sheathe blight fungi population from Guangdong. A total of 39 pathotype based on 9 rice hosts were recorded in fifty-five isolates,and ninety-one RAPD bands t were amplified with eleven arbitrary decamer primers,among which 94.51% were polymorphic. Each isolate of R. solani AG-1 IA has unique RAPD molecular fingerprint pattern based on twenty-two RAPD putative loci. The fifty-five isolates were classified into different cluster groups,according to the virulence data,RAPD 0/1 data,the combined virulence and RAPD data,by using UPGMA analyses,and the first cluster consisted of a majority of isolates. The separate virulence and RAPD molecular Jacarrd similarity matrix were compared for level of relation using MXCOMP program. The correlation coefficient was very low (r=0.0137),which suggested the DNA molecular haplotype,was largely independent of virulence,and no association between RAPD genotype and pathotype
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It is firstly analyzed the relationship between randomly amplified polymorphic DNA (RAPD) genotype and pathotype of rice sheathe blight fungi (Rhizoctonia solani AG-1 IA ) from Guangdong province in China. The results show that pathotype diversity (H=3.485) and genetic diversity are abundant in rice sheathe blight fungi population from Guangdong. A total of 39 pathotype based on 9 rice hosts were recorded in fifty-five isolates,and ninety-one RAPD bands t were amplified with eleven arbitrary decamer primers,among which 94.51% were polymorphic. Each isolate of R. solani AG-1 IA has unique RAPD molecular fingerprint pattern based on twenty-two RAPD putative loci. The fifty-five isolates were classified into different cluster groups,according to the virulence data,RAPD 0/1 data,the combined virulence and RAPD data,by using UPGMA analyses,and the first cluster consisted of a majority of isolates. The separate virulence and RAPD molecular Jacarrd similarity matrix were compared for level of relation using MXCOMP program. The correlation coefficient was very low (r=0.0137),which suggested the DNA molecular haplotype,was largely independent of virulence,and no association between RAPD genotype and pathotype
Key concepts: RAPD, Rhizoctonia solani, Biology, UPGMA, Genotype, Genetic diversity, Virulence, Population