2016INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYRequires access

Fulvivirga lutimaris sp. nov., isolated from a tidal flat sediment

Yong-Taek Jung, Min-Ji Ha, Sooyeon Park, Jung‐Sook Lee, Jung‐Hoon Yoon

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Abstract

A Gram-stain-negative, non-flagellated, non-gliding and rod-shaped bacterial strain, designated TM-6T, was isolated from a tidal flat sediment in the Korean peninsula. Strain TM-6T was found to grow optimally at pH 7.0–8.0, at 30 °C and in the presence of 2–3% (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain TM-6T joined the clade comprising recognized species of the genus Fulvivirga , with which it exhibited 94.7– 95.2 % sequence similarity. Strain TM-6T was found to contain iso-C15 : 0, iso-C15 : 1 G and iso-C17 : 0 3-OH as major fatty acids. The only isoprenoid quinone was menaquinone-7 (MK-7). The major polar lipids were identified as phosphatidylethanolamine and three unidentified lipids. The DNA G+C content of strain TM-6T was 50.9 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, revealed that strain TM-6T is distinguishable from recognized Fulvivirgaspecies. On the basis of the data presented, strain TM-6T is proposed to represent a novel species of the genus Fulvivirga , for which the name Fulvivirga lutimaris sp. nov. is proposed. The type strain is TM-6T (=KCTC 42720T=CECT 9024T).

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What this paper is about

A Gram-stain-negative, non-flagellated, non-gliding and rod-shaped bacterial strain, designated TM-6T, was isolated from a tidal flat sediment in the Korean peninsula. Strain TM-6T was found to grow optimally at pH 7.0–8.0, at 30 °C and in the presence of 2–3% (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain TM-6T joined the clade comprising recognized species of the genus Fulvivirga , with which it exhibited 94.7– 95.2 % sequence similarity. Strain TM-6T was found to contain iso-C15 : 0, iso-C15 : 1 G and iso-C17 : 0 3-OH as major fatty acids. The only isoprenoid quinone was menaquinone-7 (MK-7). The major polar lipids were identified as phosphatidylethanolamine and three unidentified lipids. The DNA G+C content of strain TM-6T was 50.9 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, revealed that strain TM-6T is distinguishable from recognized Fulvivirgaspecies. On the basis of the data presented, strain TM-6T is proposed to represent a novel species of the genus Fulvivirga , for which the name Fulvivirga lutimaris sp. nov. is proposed. The type strain is TM-6T (=KCTC 42720T=CECT 9024T).

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Available abstract

A Gram-stain-negative, non-flagellated, non-gliding and rod-shaped bacterial strain, designated TM-6T, was isolated from a tidal flat sediment in the Korean peninsula. Strain TM-6T was found to grow optimally at pH 7.0–8.0, at 30 °C and in the presence of 2–3% (w/v) NaCl. A neighbour-joining phylogenetic tree based on 16S rRNA gene sequences showed that strain TM-6T joined the clade comprising recognized species of the genus Fulvivirga , with which it exhibited 94.7– 95.2 % sequence similarity. Strain TM-6T was found to contain iso-C15 : 0, iso-C15 : 1 G and iso-C17 : 0 3-OH as major fatty acids. The only isoprenoid quinone was menaquinone-7 (MK-7). The major polar lipids were identified as phosphatidylethanolamine and three unidentified lipids. The DNA G+C content of strain TM-6T was 50.9 mol%. Differential phenotypic properties, together with the phylogenetic distinctiveness, revealed that strain TM-6T is distinguishable from recognized Fulvivirgaspecies. On the basis of the data presented, strain TM-6T is proposed to represent a novel species of the genus Fulvivirga , for which the name Fulvivirga lutimaris sp. nov. is proposed. The type strain is TM-6T (=KCTC 42720T=CECT 9024T).

Key concepts: 16S ribosomal RNA, Tidal flat, Biology, Phylogenetic tree, Strain (injury), Genus, Clade, Sediment

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