RAPD analysis in mungbean ( Vigna radiata (L.) Wilczek): I. Assessment of genetic diversity
Madhu Saini, Subhadra Singh, Zahid Hussain, Anita Yadav
Abstract
Madhu Saini, Subhadra Singh, Zahid Hussain, Anita Yadav
Abstract
Genetic diversity was estimated among 39 genotypes of mungbean [ Vigna radiata (L.) Wilczek] using 30 RAPD primers. A total of 411 RAPD amplicons were obtained, of which 382 (92.9%) were polymorphic. The per cent polymorphism ranged from 42.85 to 100 per cent. A wide range (40.8 to 90.3%) of Jaccards similarity coefficient was observed between the pairs of genotypes; the highest being observed between MH-98-1 and Vs ML-839, and the lowest between UPM-98 and Vs ML-131. The genotypes with a common ancestry and/or used repeatedly in mungbean improvement programme exhibited higher genotypic similarity. The extent of diversity among cultivars was also studied in relation to their source, and set of genotypes with narrow genetic base developed from particular place were identified. The genotypes formed 11 clusters, three main groups and eight minor groups, based on unweighted pair group methods for arithmetic mean (UPGMA). The cultivar ML-131 occupied a unique position and was most diverse from rest of the genotypes. Principal coordinate analysis and normalized Mantel statistics (r=0.92) supported cluster analysis. A concordance was observed between the position of genotypes in the cluster and their pedigree information.
OpenAlex reports 12 citations for this work. Citation counts describe recorded attention and do not establish research quality.
A contribution statement is not available in the OpenAlex record.
Method details are not available in the OpenAlex metadata.
Findings are not separately available in the OpenAlex metadata.
Limitations are not available in the OpenAlex metadata.
Application details are not available in the OpenAlex metadata.
Genetic diversity was estimated among 39 genotypes of mungbean [ Vigna radiata (L.) Wilczek] using 30 RAPD primers. A total of 411 RAPD amplicons were obtained, of which 382 (92.9%) were polymorphic. The per cent polymorphism ranged from 42.85 to 100 per cent. A wide range (40.8 to 90.3%) of Jaccards similarity coefficient was observed between the pairs of genotypes; the highest being observed between MH-98-1 and Vs ML-839, and the lowest between UPM-98 and Vs ML-131. The genotypes with a common ancestry and/or used repeatedly in mungbean improvement programme exhibited higher genotypic similarity. The extent of diversity among cultivars was also studied in relation to their source, and set of genotypes with narrow genetic base developed from particular place were identified. The genotypes formed 11 clusters, three main groups and eight minor groups, based on unweighted pair group methods for arithmetic mean (UPGMA). The cultivar ML-131 occupied a unique position and was most diverse from rest of the genotypes. Principal coordinate analysis and normalized Mantel statistics (r=0.92) supported cluster analysis. A concordance was observed between the position of genotypes in the cluster and their pedigree information.
Key concepts: Vigna, UPGMA, RAPD, Genetic diversity, Radiata, Biology, Genotype, Genetic distance