An overview of psd: Adaptive sine multitaper power spectral density estimation in R
Andrew J. Barbour, Robert L. Parker
Abstract
Andrew J. Barbour, Robert L. Parker
Abstract
This vignette provides an overview of some features included in the package psd, designed to compute estimates of power spectral density (PSD) for a univariate series in a sophisticated manner, with very little tuning effort. The sine multitapers are used, and the number of tapers varies with spectral shape, according to the optimal value proposed by Riedel and Sidorenko (1995). The adaptive procedure itera-tively refines the optimal number of tapers at each frequency based on the spectrum from the previous iteration. Assuming the adaptive procedure converges, this produces power spectra with significantly lower spectral variance relative to results from less-sophisticated estimators. Sine tapers exhibit excellent leakage suppression characteristics, so bias effects are also reduced. Resolution and uncertainty vary with the number of tapers, which means we do not need to resort to either (1) windowing methods, which in-herently degrade resolution at low-frequency (e.g. Welch’s method); or (2) smoothing kernels, which can badly distort important features without careful tuning (e.g. the Daniell kernel in stats::spectrum). In this regards psd is best suited for data having large dynamic range and some mix of narrow and wide-band structure, features typically found in geophysical datasets.
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This vignette provides an overview of some features included in the package psd, designed to compute estimates of power spectral density (PSD) for a univariate series in a sophisticated manner, with very little tuning effort. The sine multitapers are used, and the number of tapers varies with spectral shape, according to the optimal value proposed by Riedel and Sidorenko (1995). The adaptive procedure itera-tively refines the optimal number of tapers at each frequency based on the spectrum from the previous iteration. Assuming the adaptive procedure converges, this produces power spectra with significantly lower spectral variance relative to results from less-sophisticated estimators. Sine tapers exhibit excellent leakage suppression characteristics, so bias effects are also reduced. Resolution and uncertainty vary with the number of tapers, which means we do not need to resort to either (1) windowing methods, which in-herently degrade resolution at low-frequency (e.g. Welch’s method); or (2) smoothing kernels, which can badly distort important features without careful tuning (e.g. the Daniell kernel in stats::spectrum). In this regards psd is best suited for data having large dynamic range and some mix of narrow and wide-band structure, features typically found in geophysical datasets.
Key concepts: Multitaper, Spectral density, Estimator, Spectral leakage, Sine, Smoothing, Mathematics, Algorithm