Brownian dynamics of freely jointed chains: Chain conformation with excluded volume effects
Richard S. Parnas, Yoram Cohen
Abstract
Richard S. Parnas, Yoram Cohen
Abstract
A freely jointed bead-rod chain model was developed to describe the configurations of polymer chains in solution with and without excluded volume effects. The dynamic behavior of model chains was investigated with Brownian dynamics simulations and Fourier analysis. Numerical simulation results are in good agreement with the analytical solutions for the conformations of freely jointed chains, which are available only for chains without excluded volume effects. Stationary statistical results obtained by Brownian dynamics simulations show that excluded volume effects significantly expand the model chains in solution. Fourier analysis of computed numerical data demonstrate that configurational transitions occur over a broad range of time scales.
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A freely jointed bead-rod chain model was developed to describe the configurations of polymer chains in solution with and without excluded volume effects. The dynamic behavior of model chains was investigated with Brownian dynamics simulations and Fourier analysis. Numerical simulation results are in good agreement with the analytical solutions for the conformations of freely jointed chains, which are available only for chains without excluded volume effects. Stationary statistical results obtained by Brownian dynamics simulations show that excluded volume effects significantly expand the model chains in solution. Fourier analysis of computed numerical data demonstrate that configurational transitions occur over a broad range of time scales.
Key concepts: Brownian dynamics, Excluded volume, Chain (unit), Brownian motion, Statistical physics, Fourier transform, Molecular dynamics, Dynamics (music)