2013The Journal of Physical Chemistry LettersRequires access

Unexpectedly Small Effect of the DNA Environment on Vertical Ionization Energies of Aqueous Nucleobases

Eva Pluhařová, Christi Schroeder, Robert Seidel, Stephen E. Bradforth, Bernd Winter, Manfred Faubel, Petr Slavı́ček, Pavel Jungwirth

Open publisher page 40 citations

Abstract

By a combination of ab initio calculations and photoelectron spectroscopy, we demonstrate that the DNA surrounding has only a negligible effect on ionization energies of nucleobases in the native aqueous environment. The aqueous solution thus effectively screens the sugar–phosphate backbone and the neighboring nucleobases. Consequently, vertical ionization potentials of nucleobases in aqueous DNA can be reliably derived from the corresponding values for its building blocks in water, that is, aqueous nucleobases, nucleosides, or nucleotides.

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What this paper is about

By a combination of ab initio calculations and photoelectron spectroscopy, we demonstrate that the DNA surrounding has only a negligible effect on ionization energies of nucleobases in the native aqueous environment. The aqueous solution thus effectively screens the sugar–phosphate backbone and the neighboring nucleobases. Consequently, vertical ionization potentials of nucleobases in aqueous DNA can be reliably derived from the corresponding values for its building blocks in water, that is, aqueous nucleobases, nucleosides, or nucleotides.

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Available abstract

By a combination of ab initio calculations and photoelectron spectroscopy, we demonstrate that the DNA surrounding has only a negligible effect on ionization energies of nucleobases in the native aqueous environment. The aqueous solution thus effectively screens the sugar–phosphate backbone and the neighboring nucleobases. Consequently, vertical ionization potentials of nucleobases in aqueous DNA can be reliably derived from the corresponding values for its building blocks in water, that is, aqueous nucleobases, nucleosides, or nucleotides.

Key concepts: Nucleobase, Aqueous solution, Ionization, Chemistry, DNA, Ab initio, Nucleotide, Computational chemistry

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