Dual Recognition of Double-Stranded DNA by 2′-Aminoethoxy-Modified Oligonucleotides
Bernard M. Cuenoud, Florence Casset, Dieter Hüsken, François Natt, Romain M. Wolf, Karl‐Heinz Altmann, Pierre Martin, Heinz E. Moser
Abstract
Bernard M. Cuenoud, Florence Casset, Dieter Hüsken, François Natt, Romain M. Wolf, Karl‐Heinz Altmann, Pierre Martin, Heinz E. Moser
Abstract
Simultaneous interaction of the 2'-aminoethoxy-modified oligonucleotides with the phosphodiester backbone (shown on the right, A) and with the bases through Hoogsteen base contacts (B) is seen at each base-pair step of the duplex DNA target. The electrostatic interaction between the protonated amino group and the negatively charged phosphate group provides for a dramatic increase in the binding affinity and the association rate constant.
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Simultaneous interaction of the 2'-aminoethoxy-modified oligonucleotides with the phosphodiester backbone (shown on the right, A) and with the bases through Hoogsteen base contacts (B) is seen at each base-pair step of the duplex DNA target. The electrostatic interaction between the protonated amino group and the negatively charged phosphate group provides for a dramatic increase in the binding affinity and the association rate constant.
Key concepts: Oligonucleotide, DNA, Dual (grammatical number), Computational biology, Biology, Chemistry, Genetics, Philosophy