2002The Journal of Physical Chemistry ARequires access

Accurate Structures and Binding Energies for Stacked Uracil Dimers

Matthew L. Leininger, Ida M. B. Nielsen, Michael E. Colvin, Curtis L. Janssen

Open publisher page 73 citations

Abstract

The face-to-face and face-to-back stacked uracil dimers have been investigated by second-order Møller−Plesset (MP2) perturbation theory and by the coupled-cluster singles and doubles method augmented with a perturbative contribution from connected triple substitutions [CCSD(T)]. Full MP2 geometry optimizations were performed with a TZ2P(f,d)++ basis and with the 6-31G* basis for which harmonic vibrational frequencies were computed as well. Complete basis set MP2 binding energies were obtained from basis set extrapolations using the correlation-consistent basis sets cc-pVXZ (X = D−5) and aug-cc-pVXZ (X = D−Q). Higher-order correlation effects were gauged by computing the MP2 → CCSD(T) shift in the counterpoise-corrected binding energy using a modified 6-31G* basis set. By adding this correction to the infinite basis set limit MP2 binding energies, final estimates of 9.7 and 8.8 kcal mol -1 are obtained for the binding energies of the face-to-face and face-to-back structures, respectively.

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What this paper is about

The face-to-face and face-to-back stacked uracil dimers have been investigated by second-order Møller−Plesset (MP2) perturbation theory and by the coupled-cluster singles and doubles method augmented with a perturbative contribution from connected triple substitutions [CCSD(T)]. Full MP2 geometry optimizations were performed with a TZ2P(f,d)++ basis and with the 6-31G* basis for which harmonic vibrational frequencies were computed as well. Complete basis set MP2 binding energies were obtained from basis set extrapolations using the correlation-consistent basis sets cc-pVXZ (X = D−5) and aug-cc-pVXZ (X = D−Q). Higher-order correlation effects were gauged by computing the MP2 → CCSD(T) shift in the counterpoise-corrected binding energy using a modified 6-31G* basis set. By adding this correction to the infinite basis set limit MP2 binding energies, final estimates of 9.7 and 8.8 kcal mol -1 are obtained for the binding energies of the face-to-face and face-to-back structures, respectively.

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Available abstract

The face-to-face and face-to-back stacked uracil dimers have been investigated by second-order Møller−Plesset (MP2) perturbation theory and by the coupled-cluster singles and doubles method augmented with a perturbative contribution from connected triple substitutions [CCSD(T)]. Full MP2 geometry optimizations were performed with a TZ2P(f,d)++ basis and with the 6-31G* basis for which harmonic vibrational frequencies were computed as well. Complete basis set MP2 binding energies were obtained from basis set extrapolations using the correlation-consistent basis sets cc-pVXZ (X = D−5) and aug-cc-pVXZ (X = D−Q). Higher-order correlation effects were gauged by computing the MP2 → CCSD(T) shift in the counterpoise-corrected binding energy using a modified 6-31G* basis set. By adding this correction to the infinite basis set limit MP2 binding energies, final estimates of 9.7 and 8.8 kcal mol -1 are obtained for the binding energies of the face-to-face and face-to-back structures, respectively.

Key concepts: Counterpoise, Basis set, Perturbation theory (quantum mechanics), Binding energy, Basis (linear algebra), Coupled cluster, Electronic correlation, Chemistry

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