1996International Journal of Modern Physics CRequires access

HOW IS SYMPLECTIC INTEGRATOR APPLICABLE TO MOLECULAR DYNAMICS?

Tsuneyasu Okabe, Hiroaki Yamada, Masaki Gôda

Open publisher page 7 citations

Abstract

We systematically investigate how symplectic integrator schemes are effective when applied to molecular dynamics method. The performances are estimated from a point of view of the total energy conservation by investigating molecular dynamics of one-component Lennard–Jones system in constant volume and constant temperature and pressure. It is shown that numerical simulations by the symplectic integrator scheme are better than those by classical schemes for a long-time simulation even in the case of large step size. The performances of various orders of symplectic integrator are evaluated.

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What this paper is about

We systematically investigate how symplectic integrator schemes are effective when applied to molecular dynamics method. The performances are estimated from a point of view of the total energy conservation by investigating molecular dynamics of one-component Lennard–Jones system in constant volume and constant temperature and pressure. It is shown that numerical simulations by the symplectic integrator scheme are better than those by classical schemes for a long-time simulation even in the case of large step size. The performances of various orders of symplectic integrator are evaluated.

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Available abstract

We systematically investigate how symplectic integrator schemes are effective when applied to molecular dynamics method. The performances are estimated from a point of view of the total energy conservation by investigating molecular dynamics of one-component Lennard–Jones system in constant volume and constant temperature and pressure. It is shown that numerical simulations by the symplectic integrator scheme are better than those by classical schemes for a long-time simulation even in the case of large step size. The performances of various orders of symplectic integrator are evaluated.

Key concepts: Integrator, Symplectic integrator, Symplectic geometry, Constant (computer programming), Molecular dynamics, Variational integrator, Computer science, Component (thermodynamics)

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