Molecular Dynamics Simulation of Heavy Metal Ions in Aqueous Solution Using Lennard-Jones 12-6 Potential
Amir Ansari Dezfoli, Mozaffar Ali Mehrabian, Hassan Hashemipour
Abstract
Amir Ansari Dezfoli, Mozaffar Ali Mehrabian, Hassan Hashemipour
Abstract
The dynamic and structural properties of some heavy metal ions, such as Cd2+, Ni2+, and Zn2+ solved in water, were studied using molecular dynamics (MD) simulation. In this paper, the radial distribution function (RDF) and self-diffusion coefficient were determined and compared with the experimental data. The results showed that the surrounding water molecules around the metal ions form a shell-like arrangement. The number of water molecules contributing in this arrangement (Nc) for Ni2+, Cd2+, and Zn2+ were, respectively, 8.8, 7.4, and 6. Noticeable differences between the simulation results and experimental data were observed for the nickel ion structural properties when the MM2 Lennard-Jones parameters were used to predict the interaction of nickel and water molecules. To resolve this problem, the new Ni2+-water Lennard-Jones interaction parameters were used in the MD simulation program to predict the structural properties of Ni2+ solution, which gave acceptable results.
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The dynamic and structural properties of some heavy metal ions, such as Cd2+, Ni2+, and Zn2+ solved in water, were studied using molecular dynamics (MD) simulation. In this paper, the radial distribution function (RDF) and self-diffusion coefficient were determined and compared with the experimental data. The results showed that the surrounding water molecules around the metal ions form a shell-like arrangement. The number of water molecules contributing in this arrangement (Nc) for Ni2+, Cd2+, and Zn2+ were, respectively, 8.8, 7.4, and 6. Noticeable differences between the simulation results and experimental data were observed for the nickel ion structural properties when the MM2 Lennard-Jones parameters were used to predict the interaction of nickel and water molecules. To resolve this problem, the new Ni2+-water Lennard-Jones interaction parameters were used in the MD simulation program to predict the structural properties of Ni2+ solution, which gave acceptable results.
Key concepts: Molecular dynamics, Radial distribution function, Metal ions in aqueous solution, Aqueous solution, Molecule, Chemistry, Ion, Metal